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|
Attribute
|
LMG 727
|
%
|
LMG 728
|
%
|
LMG 730
|
%
|
|---|
|
Genome size (bp)
|
4,754,971
|
100.00
|
4,610,480
|
100.00
|
4,399,523
|
100.00
|
|
DNA coding (bp)
|
4,132,338
|
86.90
|
3,961,227
|
85.91
|
3,805,731
|
86.50
|
|
DNA G+C (bp)
|
3,250,022
|
68.35
|
3,149,419
|
68.31
|
3,007,954
|
68.37
|
|
DNA scaffolds
|
58
|
100.00
|
129
|
100.00
|
84
|
100.00
|
|
Total genes
|
3,933
|
100.00
|
3,906
|
100.00
|
3,803
|
100.00
|
|
Protein coding genes
|
3,878
|
98.6
|
3,851
|
98.6
|
3,749
|
98.6
|
|
RNA genes
|
55
|
1.40
|
55
|
1.40
|
54
|
1.40
|
|
Pseudo genes
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
|
Genes in internal clusters
|
978
|
24.86
|
924
|
23.65
|
876
|
23.03
|
|
Genes with function prediction
|
2,781
|
70.7
|
2,759
|
70.63
|
2,697
|
70.91
|
|
Genes assigned to COGs
|
2,987
|
75.94
|
2,935
|
75.14
|
2,928
|
76.99
|
|
Genes with Pfam domains
|
3,045
|
77.42
|
2,984
|
76.39
|
2,968
|
78.04
|
|
Genes with signal peptides
|
585
|
14.87
|
586
|
15
|
553
|
14.54
|
|
Genes with transmembrane helices
|
954
|
24.25
|
935
|
23.93
|
918
|
24.13
|
|
CRISPR repeats
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
0.00
|
