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Table 4 Number of genes associated with general COG functional categories

From: Complete genome sequence of Halomonas sp. R5-57

Code Value % age Description
J 210 4.6 Translation, ribosomal structure and biogenesis
A 1 0 RNA processing and modification
K 397 8.6 Transcription
L 204 4.4 Replication, recombination and repair
B 7 0.2 Chromatin structure and dynamics
D 36 0.8 Cell cycle control, cell division, chromosome partitioning
V 64 1.4 Defense mechanisms
T 262 5.7 Signal transduction mechanisms
M 255 5.5 Cell wall/membrane biogenesis
N 114 2.5 Cell motility
U 88 1.9 Intracellular trafficking and secretion
O 178 3.9 Posttranslational modification, protein turnover, chaperones
C 300 6.5 Energy production and conversion
G 340 7.4 Carbohydrate transport and metabolism
E 518 11.3 Amino acid transport and metabolism
F 93 2.0 Nucleotide transport and metabolism
H 198 4.3 Coenzyme transport and metabolism
I 180 3.9 Lipid transport and metabolism
P 319 6.9 Inorganic ion transport and metabolism
Q 157 3.4 Secondary metabolites biosynthesis, transport and catabolism
R 626 13.6 General function prediction only
S 379 8.2 Function unknown
- 374 8.1 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome