You are viewing the site in preview mode
Skip to main content
|
Attribute
|
Value
|
% of Totala
|
|---|
|
Genome size (bp)
|
3,974,949
|
100.00
|
|
DNA coding (bp)
|
3,051,435
|
76.76
|
|
DNA G + C (bp)
|
1,939,775
|
48.80
|
|
DNA scaffolds
|
40
|
100.00
|
|
Total genesb
|
3941
|
100.00
|
|
Protein coding genes
|
3866
|
98.09
|
|
RNA genesc
|
75
|
1.91
|
|
Pseudo genesd
|
n.d.
|
n.d.
|
|
Genes in internal clusters
|
2118
|
54.78
|
|
Genes with function prediction
|
2468
|
63.38
|
|
Genes assigned to COGs
|
1803
|
46.63
|
|
Genes with Pfam domains
|
2634
|
68.13
|
|
Genes with signal peptides
|
292
|
7.55
|
|
Genes with transmembrane helices
|
880
|
22.33
|
|
CRISPR repeats
|
0
|
0.00
|
-
aThe total is based on either the size of the genome in base pairs or the total number of genes in the annotated genome
-
bIncludes tRNA, tmRNA, rRNA
-
cIncludes 23S, 16S and 5S rRNA
-
dn.d.: Not determined
