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Table 4 Genome statistics

From: Draft genome sequences of ‘Candidatus Chloroploca asiatica’ and ‘Candidatus Viridilinea mediisalina’, candidate representatives of the Chloroflexales order: phylogenetic and taxonomic implications

Attribute ‘Ca. Chloroploca asiatica’ B7–9 ‘Ca. Viridilinea mediisalina’ Kir15-3F
Value % of Total Value % of Total
Genome size (bp) 5,817,919 100.00 5,588,620 100.00
DNA coding (bp) 5,229,318 89.88 4,851,981 86.82
DNA G + C (bp) 3,421,494 58.81 3,241,714 58.01
DNA scaffolds 166 100.00 291 100.00
Total genes 4878 100.00 4657 100.00
Protein coding genes 4818 98.77 4595 98.67
RNA genes 60 1.23 62 1.33
Pseudo genes – – – –
Genes in internal clusters 1117 22.90 1081 23.21
Genes with function prediction 3518 72.12 3234 69.44
Genes assigned to COGs 2634 54.00 2356 50.59
Genes with Pfam domains 3550 72.78 3264 70.09
Genes with signal peptides 171 3.51 139 2.98
Genes with transmembrane helices 1371 28.11 1127 24.20
CRISPR repeats 95   445  
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Environmental Microbiome

ISSN: 2524-6372